Saturday 9 August 2014

Moving and Merging Small Files in HDFS

From http://ehukai.com/2011/06/14/using-oozie-to-process-daily-logs/

Oozie has an FS action and java action. Java actions are run by a single mapper that executes it main() method. The Java action support passing arguments and setting java opts. 
I knew there was a method, moveToLocalFile(), on the Hadoop FileSystem class. However, the method only appears to work for a single file. FileUtil class that has a static method called copyMerge(). The method, copyMerge(), takes a source filesystem, source path, destination file system, destination path, and a flag to delete the source path on success. 
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package com.edmunds.dwh.processor;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.FileUtil;
import org.apache.hadoop.fs.Path;
import java.io.IOException;
/**
 * This class moves a file or directory from HDFS to a local file or directory.
 * Copyright (C) 2011 Edmunds.com
 * <p/>
 * Date: 6/9/11:10:27 AM
 *
 * @author phannon
 */
public final class HdfsToLocalFileMove {
    private final FileSystem sourceFileSystem;
    private final FileSystem destFileSystem;
    private final Configuration conf;
    public HdfsToLocalFileMove(Configuration conf, FileSystem sourceFileSystem, FileSystem destFileSystem) throws IOException {
        this.sourceFileSystem = sourceFileSystem;
        this.destFileSystem = destFileSystem;
        this.conf = conf;
    }
    public void move(Path source, Path destination) throws IOException {
        if (destFileSystem.exists(destination)) {
            destFileSystem.delete(destination, true);
        }
        if (sourceFileSystem.getFileStatus(source).isDir()) {
            FileUtil.copyMerge(sourceFileSystem, source, destFileSystem, destination, true, conf, null);
        } else {
            sourceFileSystem.moveToLocalFile(source, destination);
        }
    }
    public static void main(String[] args) throws IOException {
        Path source = new Path(args[0]);
        Path dest = new Path(args[1]);
        Configuration conf = new Configuration();
        FileSystem fsSource = source.getFileSystem(conf);
        FileSystem fsDest = FileSystem.getLocal(conf);
        HdfsToLocalFileMove move = new HdfsToLocalFileMove(conf, fsSource, fsDest);
        move.move(source, dest);
    }
}
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<action name="move-and-merge">
   <java>
   <job-tracker>${jobTracker}</job-tracker>
   <name-node>${nameNode}</name-node>
   <configuration>
    <property>
     <name>mapred.job.queue.name</name>
       <value>${queueName}</value>
    </property>
   </configuration>
    <main-class>com.edmunds.dwh.processor.HdfsToLocalFileMove</main-class>
     <arg>${outputs}</arg>
     <arg>${localDest}</arg>
   <capture-output/>
   </java>
  <ok to="end"/>
 <error to="move-and-merge"/>
</action>

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